CellexalVR.AnalysisObjects.NetworkHandler Class Reference

Represents a collection of networks placed on a skeleton like model of a graph. More...

Inheritance diagram for CellexalVR.AnalysisObjects.NetworkHandler:

Public Member Functions
void	CalculateLayoutOnAllNetworks ()
	Calculates the 2D layout of all networks. More...
void	CreateArcs (ref NetworkReader.NetworkKeyPair[] keyPairs, ref Dictionary< string, NetworkNode > nodes)
	Saves the arcs that go between the networks. More...
void	CreateNetworkAnimation (Transform graph)
	Spawn network beside graph it was created from. More...
void	DeleteNetwork ()
	Used to delete this network. Starts the same animation that is used to minimze but deletes the obj when its been minimized. More...
NetworkCenter	FindNetworkCenter (string networkCenterName)
	Finds a networkcenter in this networkhandler. More...
void	HighLightGene (string geneName)
	Highlights a gene in all networks with a red circle. More...

Public Attributes
Material	highlightMaterial
Material	normalMaterial
bool	removable
bool	removing = false
ReferenceManager	referenceManager
List< NetworkCenter >	networks = new List<NetworkCenter>()
Selection	selection
int	layoutApplied = 0

Properties
List< NetworkCenter >	Replacements [get]

Detailed Description

Represents a collection of networks placed on a skeleton like model of a graph.

Member Function Documentation

CalculateLayoutOnAllNetworks()

void CellexalVR.AnalysisObjects.NetworkHandler.CalculateLayoutOnAllNetworks

(

)

Calculates the 2D layout of all networks.

CreateArcs()

void CellexalVR.AnalysisObjects.NetworkHandler.CreateArcs	(	ref NetworkReader.NetworkKeyPair[]	keyPairs,
		ref Dictionary< string, NetworkNode >	nodes
	)

Saves the arcs that go between the networks.

Parameters

keyPairs	An array of NetworkReader.NetworkKeyPair.
nodes	All nodes in all networks.

CreateNetworkAnimation()

void CellexalVR.AnalysisObjects.NetworkHandler.CreateNetworkAnimation

(

Transform

graph

)

Spawn network beside graph it was created from.

DeleteNetwork()

void CellexalVR.AnalysisObjects.NetworkHandler.DeleteNetwork

(

)

Used to delete this network. Starts the same animation that is used to minimze but deletes the obj when its been minimized.

<summary

FindNetworkCenter()

NetworkCenter CellexalVR.AnalysisObjects.NetworkHandler.FindNetworkCenter

(

string

networkCenterName

)

Finds a networkcenter in this networkhandler.

Parameters

networkCenterName

The name of the networkcenter

Returns

A reference to the networkcenter, or null if it was not found.

HighLightGene()

void CellexalVR.AnalysisObjects.NetworkHandler.HighLightGene

(

string

geneName

)

Highlights a gene in all networks with a red circle.

Parameters

geneName

The gene to highlight.

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The documentation for this class was generated from the following file:

• cellexalvr_cloudxr/Assets/Scripts/AnalysisObjects/NetworkHandler.cs